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Plant Physiology

Photosynthesis from pigments and the Z-scheme to photophosphorylation, the Calvin cycle, C4 and CAM plants, photorespiration and limiting factors, respiration from glycolysis and fermentation to the Krebs cycle, ETS and RQ, plant growth and development, and plant growth regulators.

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1Light reaction: pigments, Z-scheme and photophosphorylation9 min read+15 XP

Light absorbed by chlorophylls and accessory pigments drives electrons from water through PS II (P680) and PS I (P700) to NADP⁺, releasing O₂; the proton gradient built on the way makes ATP by chemiosmosis.

How it's asked: Early experiments (Priestley, Ingenhousz, Sachs, Engelmann, van Niel), pigment colours on chromatography, reaction-centre wavelengths, the Z-scheme sequence, where water splitting occurs, cyclic vs non-cyclic photophosphorylation, and the location of CF0 and CF1.

Why this is true

Accessory pigments (chlorophyll b, xanthophylls, carotenoids) absorb wavelengths that chlorophyll a misses and pass the energy to a reaction-centre chlorophyll a, giving PS II (P680) and PS I (P700); they also protect chlorophyll a from photo-oxidation. Excited P680 hands an electron to a primary acceptor, and the electron runs downhill through cytochromes to PS I, where light boosts it again before it reduces NADP⁺ to NADPH + H⁺ — an uphill–downhill–uphill path shaped like a Z. The hole left in PS II is filled by splitting water, so the O₂ of photosynthesis comes from water, as van Niel inferred. Protons pile up in the thylakoid lumen for three reasons: water is split on the lumen side, the PS II primary acceptor passes electrons to a hydrogen carrier that moves protons from the stroma into the lumen, and NADP reductase on the stroma side consumes stromal protons. Protons can return to the stroma only through the CF0 channel of ATP synthase, and this flow drives CF1 to make ATP on the stroma side, where the Calvin cycle needs it. If electrons from PS I cycle back to the chain instead of reducing NADP⁺, protons are still pumped, so ATP is made without NADPH or O₂.

Key points

Non-cyclic electron flow (Z-scheme)

  1. 1Water splitting2H₂O → 4H⁺ + O₂ + 4e⁻ on the lumen side, linked to PS II

Cyclic vs non-cyclic photophosphorylation

FeatureNon-cyclicCyclic
PhotosystemsPS II and PS IPS I only
Electron sourceWaterElectrons return to P700
ProductsATP + NADPH; O₂ evolvedATP only; no O₂
LocationGrana lamellaeStroma lamellae
LightWavelengths that excite both photosystemsCan run when only light beyond 680 nm is available

Common traps

  • PS I has P700 and PS II has P680 — the numbering reflects order of discovery, not the order of action (PS II acts first).
  • Protons accumulate in the lumen, not the stroma; ATP is made on the stroma side as they flow out through CF0.

Worked example

Isolated thylakoids are illuminated only with far-red light of 700 nm. ATP formation continues, but no O₂ is released and NADP⁺ is not reduced.

High-yield

PS I = P700, PS II = P680; water split with PS II on lumen side. Stroma lamellae lack PS II and NADP reductase → cyclic → ATP only. CF0 channel, CF1 makes ATP facing stroma.

Quick check

Q1.The splitting of water during photosynthesis is associated with:

Q2.Cyclic photophosphorylation occurs in stroma lamellae because they lack:

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